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About CRUK Scotland Institute

Find out what we do, how we do it and why we do what we do.

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Life in Glasgow

Find out about living and working in Glasgow and Scotland.

Our Research

Explore the science at CRUK Scotland Institute. Our research groups, the people who lead them, and how we work.

Operations

The teams and services that keep the Institute running and support our research.

Partners

The networks and organisations we work with to accelerate cancer research.

Careers & Study

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Studentships

PhD opportunities at the Institute

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Internships

For undergraduate and masters students

Childhood Leukaemia

Group Leader:
Prof Chris Halsey

Cancer is the leading cause of death for children aged 1-14 years and despite improvements in survival, leukaemia still accounts for about a quarter of these deaths. Even if cured, many survivors have significant chemotherapy side-effects resulting in late mortality, reduced academic achievement, poor quality of life and accompanying health and societal impacts.

The commonest long-term effects are adverse neurological/neurocognitive outcomes seen in 20-40% of patients with acute lymphoblastic leukaemia (ALL). This reflects the use of neurotoxic agents to prevent ALL relapse within the central nervous system (CNS). There is an urgent need to develop more effective, and less-toxic, treatments for CNS-ALL. This is the key mission of our childhood leukaemia research group.

Our current therapies for CNS-ALL are both toxic and onerous. Treatment involves up to 26 chemotherapy injections into the CSF via spinal-tap under sedation/anaesthetic. Current tests to detect leukaemia in CSF are crude, so treatment is given to all children and young adults, without knowing how much is really needed.

Short-term side-effects include fits (affecting about 1-in-10 patients). Longer-term side-effects include reductions in intelligence, attention span and memory (affecting about 1-in-3 patients). There are likely to be many children that are overtreated and some that require more intensive treatment but currently we have no reliable way to find this out.

Another problem is that we haven’t had any new drugs for CNS-ALL for the last 60 years. This is exacerbated by the inability to measure CNS-ALL accurately – so it is difficult to work out if a new drug is working without waiting a long time to see if the leukaemia comes back.

Research aims

Our research aims to address the two major barriers to progress in the field:

  • an incomplete understanding of the key biological mechanisms underlying ALL survival in the CNS microenvironment
  • a lack of clinically useful CNS-ALL diagnostic and prognostic biomarkers.

As well as this we are interested in finding out why only some children get neurotoxicity and if there are any ways we can prevent or reduce the side-effects of our current treatments for CNS leukaemia.

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Lab Reports

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Recent Publications

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Lab Members

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Recent Publications

2026

Eder, S. K. et al. Transverse myelitis and Guillain-Barré syndrome in pediatric lymphoid malignancies: an international retrospective study. Pediatric Blood and Cancer. 2026.

Almási, L. et al. Heterogeneity in the global practice of central nervous system staging in pediatric acute lymphoblastic leukemia. Pediatric Blood and Cancer. 2026;73(8):e70405.

Hodder, A. et al. Reduced-intensity reinduction for children and young persons with relapsed acute lymphoblastic leukemia. Leukemia. 2026;40(8):1797-1801.

van den Haak, M. A. et al. Reproducible profiling of the gut microbiota using surplus clinical Faecal Immunochemical Test (FIT) samples. Microbial Genomics. 2026;12(7):001740.

Wilson, Abbie and Halsey, Chris. Methotrexate neurological toxicities: current state-of-the-art. British Journal of Hospital Medicine. 2026;87(6):55135.

Duguid, Alasdair, Malouf, Camille, Leah, Tom, Nitsche, Leslie, Barrett, Neil A., Smith, Owen P., Halsey, Chris and Ottersbach, Katrin. miR-93-mediated PTEN suppression and CNS-specific T cell exhaustion shape the leukemia niche in infant KMT2A::AFF1+ B-ALL. Cell Reports. 2026;45(5):117353.

Duguid, Alasdair, Malouf, Camille, Nitsche, Leslie, Halsey, Chris and Ottersbach, Katrin. Mixed-lineage leukaemia cells undergo unique adaptations in the CNS niche. Experimental Hematology. 2026;154:105347.

Ren, H. et al. ‘Off-the-shelf’ dual CAR-iNKT cell immunotherapy eradicates medullary and leptomeningeal KMT2A-rearranged leukemia. Blood. 2026;147(2):180-196.

Mikkelsen, T. et al. Role of common host genome variants in Childhood Acute Lymphoblastic Leukemia. Leukemia. 2026;40(1):3-24.

2025

Ponce-Garcia, F. M. et al. Canagliflozin synergises with serine restriction mediating anti-leukaemic effects in T-cell acute lymphoblastic leukaemia. Molecular Metabolism. 2025;102:102275.

Amaral, P. et al. Underlying biology, challenges and emergent concepts in the treatment of relapsed and refractory pediatric T-cell acute lymphoblastic leukemia. Leukemia. 2025;39(11):2575-2589.

Sharma, N. D. et al. T-cell acute lymphoblastic leukemia exploits a neural proinflammatory pathway to colonize the meninges. Journal of Clinical Investigation. 2025.

Samarakoon, Y. et al. UNC119 regulates T-cell receptor signalling in primary T cells and T acute lymphocytic leukaemia. Life Science Alliance. 2025;8(3):e202403066.

2024

Apps, J. et al. A review calling for research directed at early detection of childhood cancers: the clinical, scientific, and economic arguments for population screening and surveillance. EJC Paediatric Oncology. 2024;4:100191.

Anastasopoulou, S. et al. Severe steroid-related neuropsychiatric symptoms during paediatric acute lymphoblastic leukaemia therapy—An observational Ponte di Legno Toxicity Working Group Study. British Journal of Haematology. 2024;205(4):1450-1459.

2022

Cousins, A. et al. Central nervous system involvement in childhood acute lymphoblastic leukemia is linked to upregulation of cholesterol biosynthetic pathways. Leukemia. 2022;36(12):2903-2907.

Thastrup, Maria, Duguid, Alasdair, Mirian, Christian, Schmiegelow, Kjeld and Halsey, Christina. Central nervous system involvement in childhood acute lymphoblastic leukemia: challenges and solutions. Leukemia. 2022;36(12):2751-2768.

Pal, D. et al. hiPSC-derived bone marrow milieu identifies a clinically actionable driver of niche-mediated treatment resistance in leukemia. Cell Reports Medicine. 2022;3(8):100717.

2021

Malouf, Camille, Antunes, Eric T.B., O’Dwyer, Michael, Jakobczyk, Hélène, Sahm, Franziska, Landua, Sophie-Luise, Anderson, Richard A., Soufi, Abdenour, Halsey, Christina and Ottersbach, Katrin. MiR-130b and miR-128a are essential lineage-specific co-drivers of t(4;11) MLL-AF4 acute leukemia. Blood. 2021;138(21):2066-2092.

Rice, S. et al. A human fetal liver-derived infant MLL-AF4 acute lymphoblastic leukemia model reveals a distinct fetal gene expression program. Nature Communications. 2021;12:6905.

Zanetti, C. et al. The age of the bone marrow microenvironment influences B-cell acute lymphoblastic leukemia progression via CXCR5-CXCL13. Blood. 2021;138(19):1870-1884.

Halsey, Christina and Escherich, Gabriele. A “Goldilocks” approach to CNS leukaemia is needed. Blood. 2021;138(4):288-289.

Andrés-Jensen, L. et al. Severe toxicity free survival: physician-derived definitions of unacceptable long-term toxicities following acute lymphocytic leukaemia. Lancet Haematology. 2021;8(7):e513-e523.

Shi, Y. et al. Phase II-like murine trial identifies synergy between dexamethasone and dasatinib in T-cell acute lymphoblastic leukemia. Haematologica. 2021;106(4):1056-1066.

Lenk, L. et al. CD79a promotes CNS-infiltration and leukemia engraftment in pediatric B-cell precursor acute lymphoblastic leukemia. Communications Biology. 2021;4:73.

Group Leader

Prof Chris Halsey

Lab Members

Research Assistant

Dr Rhona Christie

Dr Rhona Christie

Information about this team member’s research interests, experience, and background will be added soon. Please check back for updates.

Clinical Research Fellow

Dr Tania Christoforaki

Dr Tania Christoforaki

Information about this team member’s research interests, experience, and background will be added soon. Please check back for updates.

Research Portfolio Manager

Dr Katy Henry

Dr Katy Henry

Information about this team member’s research interests, experience, and background will be added soon. Please check back for updates.

Bioinformatician

Dr Jonathan Josephs-Spaulding

Dr Jonathan Josephs-Spaulding

Information about this team member’s research interests, experience, and background will be added soon. Please check back for updates.

Postdoctoral Research Associate

Dr Shirley Lam

Dr Shirley Lam

Information about this team member’s research interests, experience, and background will be added soon. Please check back for updates.

PhD Student

Victoria Assmann

Victoria Assmann

Information about this team member’s research interests, experience, and background will be added soon. Please check back for updates.

PhD Student

Ilaria Di Fazio

Ilaria Di Fazio

Information about this team member’s research interests, experience, and background will be added soon. Please check back for updates.

PhD Student

Nikolai Gajic

Nikolai Gajic

Information about this team member’s research interests, experience, and background will be added soon. Please check back for updates.

PhD Student

Jordan Martin

Jordan Martin

Information about this team member’s research interests, experience, and background will be added soon. Please check back for updates.